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Center for Nephrology and Metabolic Disorders
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Vitamin K epoxide reductase complex, subunit 1

The translation product of the VKORC1 gene is involved in vitamin K activation. While some mutations cause a combined deficiency of vitamin-K dependent coagulation factors, polymorphisms in this gene's coding region and its promotor have been associated with decreased response or increased sensitivity to vitamin K antagonists.

Epidemiology

The G allele at position -1639 is more common in Caucasian while the A allel is more frequent in Chinese, which fully explains differences in warfarin susceptibility among these two populations. Some other more downstream polymorphisms, that also have been associated with varying therapeutic doses of vitamin K antagonists, appear to be in linkage disequilibrium.

AA AG GG
Caucasian 14,2% 46,7% 39,1%
Chinese 79,8% 18,3% 1,8%[Error: Macro 'ref' doesn't exist]

Gene Structure

The gene spans 4,1kb on chromosome 16 (16p11.2). The two splice variants consist of up to 3 exons. The promotor contains an E-Box at position -1644. A single nucleotide polymorphism, -1639G>A is located in the E-Box' consensus sequence (CANNTG). In various experiments, it could be demonstrated that the -1639G allele is associated with a more prominent expression of the gene, which ensues increased vitamin K activation and restraint effect of vitamin K antagonists.

Genetests:

Clinic Method Carrier testing
Turnaround 5 days
Specimen type genomic DNA
Clinic Method Massive parallel sequencing
Turnaround 25 days
Specimen type genomic DNA
Clinic Method Genomic sequencing of the entire coding region
Turnaround 5 days
Specimen type genomic DNA
Clinic Method Target mutation analysis
Turnaround 5 days
Specimen type genomic DNA

Related Diseases:

Combined deficiency of vitamin K-dependent clotting factors type 2
VKORC1
Coumarin resistance
CYP2A6
CYP2C9
CYP4F2
VKORC1
Update:
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